Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929167.1_cds_XP_016476545.1_68365
CDS Infomation

[gene=LOC107798100] [db_xref=GeneID:107798100] [protein=CTL-like protein DDB_G0274487] [protein_id=XP_016476545.1] [location=complement(join(9802..9984,10061..10294,11301..12212,12672..13085,13187..13204))] [gbkey=CDS]
Sequence

ATGGGTGCAGTAGAACCTGTAGTTGAAGAAGAAAATGGAGAAAAGGAGACTAAAATACGA
GAAGAAGAAGAGAGAGATGTGGAGAAAGGTGAAATGGGTAGTCAACAAAGGGGATTTCAG
ACGCAGCCCCCACCTCCGTACCAACAACCACCCCTACCAGCAACAGGCAGTGATAATTTT
AACATGTCGAGAATGCAAAGATTGAGTGCTACAAATCCGCTTAGGCTTGTAATGAATGCA
GGAACTAGAGTTCCTCCTCCTTATCATCACGCTCCGCCACCTGCAGCTCATCATCAGCAC
CGTTCTTTTCCGATTCCTTTTCAGCACCGCCCTTCTCCGTCTCCGTCTCCGCCTCCGCCT
CAGCCTCCGTCTCAGCACCGTCCTTCTCCGGCGCCTTCTCAGACTCGCTCCACCCCTACC
ACTACCCCTCAACAACCTTCAGTAATAACACTGAATTCAAGATCCTACACGAACAAGTTT
TCACTATTTATCTTCCTCCTACACATGGTTGCGGCAATTGGACTAGTTGGTTTTCTTCTA
TTCAAAGGTGTACAAGGTATACTAGAAGCAGGGGAAGCACAAAGAAAGGAAAAAAGGCTA
CTAAAGTATTTTTTGCCACAAGTAGAAGCAGCTGCTCTACTTAGCATAACACTAGCATTT
ATATGGCAAAAGGCAATGAGAGTGTGGCCTACATTCATGATTCATTTCATACTCTGGGGT
TCTTTTATTCTCACATTATCAGCTGGAATCCTATTGATTTGCTTCCAAAAACCTGCAACT
GATGGTGTTGGAGTTGTGTTTATTATGTTTGCAATTGGCAATGGATTGTACTCATGTTGG
GTGACGCCAAGAATCAAGTTTTGTACAAAGATTTTAATCAAAGCCCTTGAACCTGTAACA
AAATTCCGTGATTTAAACCGGCCAACTTACATAACACTTTTTGTTGGATTCTTGTGGATG
TCAATGTGGATTTTGGCTGTGATTGGAGCTATAAATTTCTACTTTCCACCTTTGATTATT
ATTTTATTGGTTCTGAGCATGGCTTGGATTACTGAGGTAATGAGGAATGTGGTGAATTTG
ACAGTGAGTAGAGTGATTGCTCTGTATTATCTAAGAGGGATGCAATCTAGCACTCAGTTT
TGTTTTCAGAGGGCATTGTCCGTGAATCTTGGGAGTGCAAGCCTCGGTTCTTTATTTGTA
CCTGCAATTGAAGCGCTGAGGATTGTGGCTCGTGGGTTGAATTTGCTAGAGGGTGAAGAT
GAGTTCATGTTTTGTTGTGCTCATTGTGGATTGAAAATCATGGATTCCATCTTTAAGCGT
GGCAATGGCTGGGCCTATGTTCAGATTGCTACATATGGGAAAAGTTTTGTGAAGGCATCA
CAAGACACATGGGAGTTGTTTGAAAAGAGGGAAATGGAGACAATAGTAGATTCGGACATG
ACCAGTGCCATTTGCTTTCTGACCGGAGTTTGTAGCGGTTCCATTTGTGTCATTGTCGTT
GCCGCTTGGACTGCCACCGTCTACCCTAATTTCATCGCCACCTTGTCCCTCCTCTCTGCC
TACATCGGTTACCTTCTGACGAGGATTGCCATGGCTTTGCCTCACGCTTGTGTAAGTAGT
TACTACGTATGTTACGCTGAGAATCCCGATAACAGATGTTTTGACAAGTCCATAATTCAA
GATCGACTAAACTTAATGAAGTCTGATCGTGACGTGATTGTGCCCACGCCTAGATCAGTT
CCTGCTCGATTTGCACGGTAG

Peptide Sequence

PEP ID

XP_016476545.1
PEP Infomation

PREDICTED: CTL-like protein DDB_G0274487 [Nicotiana tabacum]
Sequence

MGAVEPVVEEENGEKETKIREEEERDVEKGEMGSQQRGFQTQPPPPYQQPPLPATGSDNF
NMSRMQRLSATNPLRLVMNAGTRVPPPYHHAPPPAAHHQHRSFPIPFQHRPSPSPSPPPP
QPPSQHRPSPAPSQTRSTPTTTPQQPSVITLNSRSYTNKFSLFIFLLHMVAAIGLVGFLL
FKGVQGILEAGEAQRKEKRLLKYFLPQVEAAALLSITLAFIWQKAMRVWPTFMIHFILWG
SFILTLSAGILLICFQKPATDGVGVVFIMFAIGNGLYSCWVTPRIKFCTKILIKALEPVT
KFRDLNRPTYITLFVGFLWMSMWILAVIGAINFYFPPLIIILLVLSMAWITEVMRNVVNL
TVSRVIALYYLRGMQSSTQFCFQRALSVNLGSASLGSLFVPAIEALRIVARGLNLLEGED
EFMFCCAHCGLKIMDSIFKRGNGWAYVQIATYGKSFVKASQDTWELFEKREMETIVDSDM
TSAICFLTGVCSGSICVIVVAAWTATVYPNFIATLSLLSAYIGYLLTRIAMALPHACVSS
YYVCYAENPDNRCFDKSIIQDRLNLMKSDRDVIVPTPRSVPARFAR

Transcript Sequence

Gene sequence data has not been registered.